Transcriptome Analysis:
Tackling core issues related to regulation & also mining the "data
exhaust" of this activity
In this seminar, I will discuss issues in transcriptome analysis. I
will first talk about core aspects - how we analyze the activity
patterns of genes in model organisms and humans. I will focus on how
we cluster these patterns together, finding conserved modules across
species, and then, how we analyze the regulation of these modules,
whether their dynamics is determined internally or involves an
external control. Finally, I will talk about how one can decompose
this regulation into simple logic gates, such as those seen in
electronic circuits (e.g., and/or), and how one finds a different type
of gate in the natural functioning of cells than in the dis-regulated
activity evident in cancer. In the second half of the talk, I will
look at some of the data exhaust from transcriptome analysis. That is,
how one can find additional things from this data than what is
necessarily intended. I will focus on genomic privacy: How looking at
the quantifications of expression levels can potentially reveal
something about the subjects studied, and how one can take steps to
protect patient anonymity.
http://papers.gersteinlab.org/papers/dreiss
http://papers.gersteinlab.org/papers/orthoclust
http://papers.gersteinlab.org/papers/privaseq
http://papers.gersteinlab.org/papers/loregic
Friday, May 5, 2017
Monday, April 24, 2017
NJOM 2017 Conference
We are pleased to invite you to the 2017 National Johnson O'Malley Conference in Albuquerque, NM this week April 26 - 28
Native Media Network will be exhibiting its media Platform incorporating broadcasting www.NDN1.com, On Demand Archives and its Catalog of close to 10,000 Native American book titles www.indiancountrybooks.com Please log in and use our search engine to find books by subject area, Tribal affiliation, Author, Title, ISBN. We are offering a JOM discount of 25% for any orders placed by August 30th for your organization or school system. (Enter code (FOF25) in the shopping cart checkout page. PO's and credit cards accepted.
If you have any questions please give us a call at 505-989-9590 or email info@indiancountrybooks.com
Thank you
Harmon Houghton, Program Director
www.IndianCountryBooks.com
www.NativeMediaNetwork.com
Tuesday, March 7, 2017
Must Read for Indigenous Communication - A Time Before Deception
A TIME BEFORE DECEPTION:
Truth in Communication, Culture, and Ethics
By Thomas W. Cooper
Foreword by Dr. Fox Tree
Epilogue by Chief Oren Lyons
Pages: 224 (19) photographs
ISBN: 978-0940666597 (cloth) $24.95
ISBN: 978- 0940666894 (paper) $14.95
"Here is a treasure of knowledge, insight, and especially inspiration for all who have an interest in ethical, 'authentic' communication, beyond the Native American cultures which provide both context and model...a call to learn from Indigenous Peoples...a journey of the heart as well as the mind."
--Professor David L. Smith Emmy award winning PBS Producer
IN THIS AGE OF LIES IT'S COMFORTING TO KNOW THERE WAS A TIME OF TRUTH
In his ground breaking exploration of the forms, meanings, and ethics of Indigenous communication, Cooper presents evidence that Native cultures may have originated from higher--not more "primitive"--civilizations. Looking beneath the surface of tribal communication, Cooper describes practices of tribal cultures worldwide and examines more specifically the communication ethic of the Dine (Navajo) of northern Arizona and the Shuswap people of British Columbia, with both of whom he lived for several months. What he finds is the deeper significance of communication for these early Americans: it is at once the embodiment of truth, the expression of gratitude to the Creator, and the vehicle for maintaining harmony with the natural world.
Please look at our On-Line catalog of close to 10,000 titles at www.indiancountrybooks.com
Log into www.nativemedianetwork.com
24/7 uninterrupted Live TV "All Indian All the Time" Programing
Email info@nativemedianetwork.com
Saturday, January 28, 2017
Woman's march in Santa Fe NM
Dear Friends & Supporters:
Native Media Network is an advocate of Native and Women's rights please explore our platform www.nativemedianetwork.com and tune in to our broadcast station for 24/7 programing www.ndn1.com view our cat6alog of over 10,000 Native American Book titles www.indiancountrybooks
Native Media Network had the honor and privilege to be able to video the Woman's March rally in Santa Fe and have posted it in our archives http://www.nativemedianetwork.com/media-archive/
Please feel free to forward the link to your friends and Facebook pages.
Thank you
Harmon Houghton, Program Director
Native Media Network
Feminine Media Network
Monday, November 28, 2016
Native Media Network / Indian Country Books
BOOK BUSTER HOLIDAY GIVEAWAY !!!!!
Purchase any Book Prior to Dec. 31st
Recieve a copy of Voice of Indigenous People FREEEE
Enter Coupon Code ICBFree
We are pleased to announce a major upgrade to our platform with the introduction of our book Catalog www.indiancountrybooks.com with a listing of over 10,000 titles of Native American Art, Biography, Ceremony, Culture, Folk lore, History, Sovereignty and Tribal heritage & traditions. The collection of books represents to most complete catalog dedicated to Indian country.
Our plan for 2017 is to introduce a Tribal publishing program with a focus on cultural literacy and K12 educational material.
Tune us in on www.NDN1.com for our 24/7 broadcast channel visit our archive tab for previous live events.
Tweet us @ndn1talk
Facebook nativemedia
Email info@nativemedianetwork.com
Above all !!!!! forward this your friends
Stand with Standing Rock - Support our Warriors
Friday, November 25, 2016
Fwd: Confirmed - Keynote Speaker for Clinical Genomics Track at BioITWorld 2017 this May 23-25 in Boston
I discuss how we interpret and prioritize the many variants in a personal genome. I concentrate on rare and somatic variants and discuss ways of assessing their impact in coding regions using protein structure. For non-coding regions, I present ways to analyze the overall burden of mutations, finding allelic elements differentially affected by variants in paternal and maternal chromosomes and using network connectivity to prioritize variants.
65 word edit
65 word edit
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i0bioit17
i0bioit17
Thursday, November 17, 2016
Native Media Network / Indian Country Books
To our viewers; thank you for your support !!!!
We are pleased to announce a major upgrade to our platform with the introduction of our book Catalog www.indiancountrybooks.com with a listing of over 10,000 titles of Native American Art, Biography, Ceremony, Culture, Folk lore, History, Sovereignty and Tribal heritage & traditions. The collection of books represents to most complete catalog dedicated to Indian country.
Holiday Discount of 25% for all orders placed by December 31, 2016 * (Use Code ICB25)
Our plan for 2017 is to introduce a Tribal publishing program with a focus on cultural literacy and K12 educational material.
Tune us in on www.NDN1.com for our 24/7 broadcast channel visit our archive tab for previous live events.
Tweet us @ndn1talk
Facebook nativemedia
Email info@nativemedianetwork.com
Above all !!!!! forward this your friends
Stand with Standing Rock - Support our Warriors
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